Biosynthetic Pathways of Tryptophan Metabolites in Saccharomyces cerevisiae Strain: Insights and Implications.
Study Design
- Study Type
- In vitro
- Population
- In vitro study using probiotic yeast strain Saccharomyces cerevisiae STG S101 for biosynthesis of tryptophan metabolites (5-HTP, serotonin, melatonin) with 11 experimental media combinations.
- Intervention
- Biosynthetic Pathways of Tryptophan Metabolites in Saccharomyces cerevisiae Strain: Insights and Implications. None
- Comparator
- Various media combinations without tryptophan supplementation
- Primary Outcome
- Biosynthesis yields of 5-HTP, serotonin, and melatonin by Saccharomyces cerevisiae STG S101
- Effect Direction
- Positive
- Risk of Bias
- Unclear
Abstract
Tryptophan metabolites, such as 5-hydroxytryptophan (5-HTP), serotonin, and melatonin, hold significant promise as supplements for managing various mood-related disorders, including depression and insomnia. However, their chemical production via chemical synthesis and phytochemical extraction presents drawbacks, such as the generation of toxic byproducts and low yields. In this study, we explore an alternative approach utilizing S. cerevisiae STG S101 for biosynthesis. Through a series of eleven experiments employing different combinations of tryptophan supplementation, Tween 20, and HEPES buffer, we investigated the production of these indolamines. The tryptophan metabolites were analyzed using liquid chromatography with tandem mass spectrometry (LC-MS/MS). Notably, setups replacing peptone in the YPD media with tryptophan (Run 3) and incorporating tryptophan along with 25 mM HEPES buffer (Run 4) demonstrated successful biosynthesis of 5-HTP and serotonin. The highest 5-HTP and serotonin concentrations were 58.9 ± 16.0 mg L-1 and 0.0650 ± 0.00211 mg L-1, respectively. Melatonin concentrations were undetected in all the setups. These findings underscore the potential of using probiotic yeast strains as a safer and conceivably more cost-effective alternative for indolamine synthesis. The utilization of probiotic strains presents a promising avenue, potentially offering scalability, sustainability, reduced environmental impact, and feasibility for large-scale production.
TL;DR
The findings underscore the potential of using probiotic yeast strains as a safer and conceivably more cost-effective alternative for indolamine synthesis, potentially offering scalability, sustainability, reduced environmental impact, and feasibility for large-scale production.
Full Text
1. Introduction
5-hydroxytryptophan (5-HTP), 5-hydroxytryptamine (serotonin), and melatonin are tryptophan metabolites involved in several physiological processes, including memory, sleep, social behavior, and pain [
Probiotics are defined as “live microorganisms that are beneficial to the health of the host when administered in sufficient amounts” by the World Health Organization (WHO) [
Microbial species have been used to study indolamine synthesis, including probiotic species. Özoğul et al. [
Through a series of eleven meticulously designed experiments, this study aims to explore the capacity of an
2. Results
2.1. Growth and Biosynthesis of Tryptophan Metabolites by S. cerevisiae STG S101 Grown in YPD Media
2.1.1. Plate Count and Growth Curve
The plate count, as depicted in
2.1.2. Biosynthesis of Tryptophan Metabolites by S. cerevisiae STG S101 Grown in YPD Media
The concentrations of the sixteen tryptophan metabolites synthesized by the yeast strain grown in YPD media are detailed in
2.2. Growth and Biosynthesis of Tryptophan Metabolites by S. cerevisiae Grown in YPD Media with 50% of Peptone Replaced by Tryptophan
2.2.1. Plate Count and Growth Curve
2.2.2. Biosynthesis of Tryptophan Metabolites by S. cerevisiae STG S101 Grown in YPD Media with 50% Peptone Replaced by Tryptophan
The concentration values of the sixteen tryptophan metabolites synthesized by
2.3. Growth and Biosynthesis of Tryptophan Metabolites by S. cerevisiae Grown in YPD Media with 100% of Peptone Replaced by Tryptophan
Building on the insights gained from the initial two experimental runs (
2.3.1. Growth Curve
The growth curves of the experimental runs involving
2.3.2. Biosynthesis of Tryptophan Metabolites by S. cerevisiae STG S101 Grown in YPD with 100% of the Peptone Replaced by Tryptophan
The analysis of the sixteen tryptophan metabolites yielded intriguing results (
3. Discussion
The results obtained from the experimental runs investigating the substitution of peptone with tryptophan in YPD media reveal significant insights into the growth dynamics and metabolic responses of
The findings suggest that substituting 50% of peptone with tryptophan in YPD media influences the synthesis of tryptophan metabolites by
Experimental runs 3 and 4 had the highest 5-HTP and tryptamine concentrations. Furthermore, only these two runs had serotonin concentrations.
The detection of 5-HTP, tryptamine, and serotonin at appreciable concentrations suggests potential applications in biotechnological processes or pharmaceutical production, where these compounds are of interest. Notably, recent patent filings show an interest in this research. For example, Grasset et al. [
Overall, these findings provide valuable insights into the metabolic responses of
4. Materials and Methods
4.1. Chemicals
Methanol (CH3OH), ammonium acetate (CH3COONH4), acetonitrile (CH3CN), picolinic acid, 3-hydroxykynurenine, quinolinic acid, serotonin, 5-hydroxytryptophan, kynurenine, 3-hydroxyanthranilic acid, tryptamine, L-tryptophan, 5-hydroxyindole, acetic acid, indoxyl sulfate, N-Acetylserotonin, xanthurenic acid, indole-3-acetamide, kynurenic acid, DL-Indole-3-lactic acid, indole-3-carboxaldehyde, indole-3-acetic acid, tryptophol, melatonin, 5-hydroxyindole acetic acid-D5, serotonin-D4, indole-3-lactic acid-D4, kynurenic acid-D5, melatonin-D4, picolinic acid-D3, tryptamine-D4, xanthurenic acid-D4, 3-hydroxyanthranilic acid-D3, 3-hydroxykynurenine-13C2-15N, 5-Hydroxytryptophan-D4, indole-3-acetamide-D5, kynurenine-D4, L-Tryptophan-13C11,15N, and tryptophan-D5 were purchased from Sigma Aldrich, Merck KGaA (Darmstadt, Germany) and other reagents and chemicals used in the study were purchased from local suppliers. The reagents and chemicals were of analytical grade or higher purity. Additionally, the yeast strain
4.2. Experimental Design
A series of eleven experiments were designed to investigate the synthesis of sixteen tryptophan metabolites, as detailed in
4.3. Probiotic Incubation and Indolamine Biosynthesis Procedures
4.3.1. Culture Media and Inoculum Preparation
First, 100 mL of 2% yeast–peptone–dextrose (YPD) liquid medium was prepared by adding 1 g of yeast extract, 2 g of peptone, and 2 g of glucose to 100 mL of distilled water. For experiments requiring peptone replacement with tryptophan, the amount of tryptophan required was corrected to the total nitrogen. Then, 4.8 mL of the media was dispensed into sterilizable 15 mL conical tubes, followed by autoclaving the media for 15 min at 121 °C and 14.7 psi. Next, 1 g of the yeast strain was transferred into a 9 mL test tube containing the 2% YPD liquid culture medium and incubated overnight at 30 °C with agitation at 200 rpm. The cells grown in the conical tube were streaked onto a Petri dish (60 × 15 mm) filled with sterile 2% YPD agar, prepared by adding 10 g of yeast extract, 20 g of peptone, 20 g of glucose, and 20 g of bacteriological agar to 1000 mL of distilled water. The Petri dish was incubated at 30 °C until isolated colonies showed growth. Afterwards, the pre-inoculum was prepared by inoculating 1 isolated colony into a conical tube containing 10 mL of cool, sterile 2% YPD broth and incubated overnight at 30 °C with continuous agitation at 200 rpm.
4.3.2. Growth Curve Study
A 20 mL flask was filled with 4.8 mL of the 2% YPD liquid culture medium and sterilized. Then, 0.2 mL of the prepared pre-inoculum presented in
4.4. Sample Preparation and Analysis
Standard stock solutions (1000 mg L−1) of the twenty analytes were individually prepared in methanol. A mixed standard solution containing the analytes at a concentration of 1000 μg L−1 was generated by obtaining aliquots of each individual stock solution. These solutions were stored in a freezer at −20 °C prior to use. The mixed standard solution was appropriately diluted with methanol to prepare the working solution series. Additionally, a mixed internal standard solution in methanol, with a concentration of 200 μg L−1, was prepared using the mixed standard solution.
Sixteen tryptophan metabolites were analyzed in samples collected after every four hours of incubation (0, 4, 8, 12, 16, 20, and 24 h). Prior to the analysis of the metabolites, the samples were first thawed to room temperature and thoroughly mixed before transferring 200 μL into 1.5 mL centrifuge tubes. Following this, a mixture consisting of 400 μL of chilled internal standard working solution, along with 200 μL of acetonitrile and 400 μL of methanol, was added to each tube. After thorough mixing, the mixture underwent centrifugation at 500 rpm for 30 min at 4 °C. To enhance protein precipitation, the centrifuged mixture was then placed at −20 °C for 1 h under light protection. Subsequently, the sample was centrifuged at 14,000 rpm for 15 min at 4 °C, and the resulting supernatant was carefully collected and concentrated to 100 μL through centrifugation. Following concentration, a mixture of 100 μL of a 5 mM ammonium acetate aqueous solution with methanol (9/1) was added, thoroughly mixed, and then injected into a high-performance liquid chromatography (HPLC) with a tandem mass spectrometer (MS/MS) for analysis. The concentration values of the metabolites were represented as mean concentrations with standard deviations.
The LC instrument setup consisted of an Agilent 1260 Infinity II HPLC and an Agilent 6470A Triple Quadrupole MS/MS. Chromatographic separation was performed with a Water Acquity UPLC high-strength silica (HSS) T3 1.8 µm (2.1 mm × 100 mm) column (Waters, Wilmslow, UK). The mass transition ions, fragmentor voltages, and collision energies of the analytes are presented in
4.5. Statistical Analysis
The temporal dynamics of metabolite concentration were investigated using repeated measured analyses of variance (ANOVA) performed by SPSS.
Figures
The growth curve of S. cerevisiae STG S101 grown in YPD media.
Growth of
Average concentrations with standard deviation of serotonin, 5-hydroxytryptophan, and tryptamine synthesis by
Average concentrations with standard deviation of serotonin, 5-hydroxytryptophan, and tryptamine synthesis by
Tables
Table 1
Plate count of
| Day 3 | Day 4 | Day 5 | |
|---|---|---|---|
| 108 |
|
|
|
| 109 |
|
|
|
Table 2
Plate count of
| Day 3 | Day 4 | Day 5 | |
|---|---|---|---|
| 108 |
|
|
|
| 109 |
|
|
|
Table 3
Summary of experiments conducted with different combinations of peptone and tryptophan in the YPD medium, along with varying concentrations of Tween 20 and HEPES buffer.
| Runs | Peptone: Tryptophan | Tween 20 (%) | HEPES Buffer (mM) |
|---|---|---|---|
| 1 | 100%:0% | 0 | 0 |
| 2 | 50%:50% | 0 | 0 |
| 3 | 0%:100% | 0 | 0 |
| 4 | 0 | 25 | |
| 5 | 0 | 100 | |
| 6 | 0.1 | 0 | |
| 7 | 0.1 | 25 | |
| 8 | 0.1 | 100 | |
| 9 | 0.2 | 0 | |
| 10 | 0.2 | 25 | |
| 11 | 0.2 | 100 |
Table 4
Comparison of microbial synthesis of target tryptophan metabolites from the literature.
| Microbial Species/Strain | Source | Substrate | Concentrations | Ref. |
|---|---|---|---|---|
| Purchased | YPD medium (with 100% tryptophan and 25 mM HEPES buffer) | 5-HTP = 58.9 ± 16.0 mg L−1 | This study | |
| Purchased | Arginine decarboxylase broth (ADB) | Tryptamine = 0.00 | [ | |
| Tryptamine = 0.00 | ||||
| Tryptamine = 0.00 | ||||
| Tryptamine = 19.6 ± 0.71 mg L−1 broth | ||||
| Purchased | Synthetic must (200 g L−1 reducing sugars + 300 mg N L−1 assimilable nitrogen), more L-tryptophan (1 mM) | 5-HTP = 949 ± 80.3 pg/109 | [ | |
| 5-HTP = 935 ± 25.2 pg/109 | ||||
| Isolated from the roots of Red Globe grape cultivar | 200 mg L−1 of 15N double-labeled L-tryptophan | 15N-5-HTP = 0.0181 ± 0.00114 mg L−1 | [ |
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